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Overview

PUREfrex® is an ultra-cool, ultra-smart, and ultra-useful in vitro coupled transcription/translation system based on E.coli translation machinery but completely different from S30 translation extracts. PUREfrex® is NOT AN EXTRACT.  PUREfrex® is a RECONSTITUTED SYSTEM comprising highly purified E. coli ribosomes, highly purified recombinant proteins, and other highly purified factors required for transcription, translation, aminoacylation, and energy regeneration. As such, PUREfrex kits provide previously unthinkable reaction controllability compared to cell extract-based systems and a well defined mix of molecular components from which to purify synthesized protein. 

Purefrex 2.0 Ordering Information   
Product Name Product Number  Total Reaction Volume per Kit 
PUREfrex 2.0
GFK-PF201-0.1-EX 100 ul  New size!
GFK-PF201-0.25-EX 250 ul
GFK-PF201-0.25-5-EX 5 x 250 ul (packaged as 5 x 250 ul) Sales to be discontinued
GFK-PF201-2ML-EX 1 x 2ml 
GFK-PF201-10ML-EX 5 x 2 ml Note: cat. no. change from GFK-PF201-10-EX
GFK-PF201-50ML-EX New size!
 Standard kit for use when protein yield is the primary goal and disulfide bonding is not required  

PUREfrex Product Pages

PUREfrex Product Manual and Package Inserts

Key Technical Notes

PUREfrex FAQ

PUREfrex in the Literature

Manufacturer's Site Links

Safety Data Sheets

Posters

  • General Protein Synthesis
    • Improvement of translational efficiency by N-terminal codon optimization in the reconstituted cell-free protein synthesis system [2016]
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    • Improvement of the translation efficiency of proline residue-containing proteins using the reconstituted cell-free protein synthesis system (PUREfrex) [2018] VIEW
      •  
    • Investigation on how to synthesize active proteins by using a reconstituted cell-free protein synthesis system (PUREfrex) [2020]
      •  
  • Disulfide Bonding
    •  
    • Synthesis of proteins containing disulfide bonds using a reconstituted cell-free protein synthesis system (PUREfrex). [2019]
      •  
    • Synthesis of proteins containing disulfide bonds using PUREfrex® with human protein disulfide isomerase [2018] VIEW
      •  
    • Synthesis of functionally active proteins containing disulfide bonds using the new PURE system (PUREfrex) [2011]
    •  
  • Synthesis of Immunoglobulins and Biologics
    •  
    • Unique Cell-Free Protein Synthesis System, PUREfrex -Useful Platform for Protein Expression in the Development of Biologics- [2018] VIEW
      •  
    • Preparation of labeled cyclic peptides with PUREfrex [2017]
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    • Development of a method for the synthesis of aglycosylated full-length IgG using PUREfrex [2017]
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    • Efficient in vitro expression of aglycosylated full-length IgG using a reconstituted cell-free protein synthesis system, PUREfrex 2.0 [2016]
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    • In vitro production of Fab, Toxin, and Immunotoxin using PUREfrex®2.0 with increased productivity [2015]
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    • Synthesis of functionally active proteins containing disulfide bonds using the new PURE system (PUREfrex) [2011]

Which PUREfrex Kit Is Right For Me?

PUREfrex® coupled transcription/translation system kits are available in four versions. 

  • PUREfrex® 2.0 - Choose 2.0 when protein yield is you primary goal and disulfide bonding is not relevant.
  • PUREfrex® 2.1 -  2.1 kits are based on 2.0 reaction components but are not premixed with reducing agent. 2.1 kits include separate vials of cysteine, DTT, and reduced glutathione allowing control of the redox environment. Choose 2.1 kits for primarily for target proteins with disulfide bonds.   
  • PUREfrex® 1.0 - 1.0 kits produce less protein than 2.X kits, but the complete contents of 1.0 kits is disclosed. Chose 1.0 when complete information on PUREfrex reaction components takes precedence over protein yield. 
  • PUREfrex® 1.0 Custom - Gene Fronteir is happy to provide custom reaction mixtures whenever feasible. Custom PUREfrex kits are based on 1.0 reaction components. Please contact us with your request.  

For detailed information about each PUREfrex® version, please use the navigation links in the sidebar at left. 

Please Note: All protein components in all PUREfrex versions are tag free allowing the synthesis of protein with any desired tag.  


About PUREfrex 2.0

PUREfrex® 1.0 was introduced in 2011. Extensive R&D efforts by Gene Frontier led to the release of PUREfrex® 2.0 in 2015, with 2-10 times the protein productivity of 1.0, fewer impurities, and other desirable performance characteristics.  

2.0 vs 1.0 Performance

 Protein yields with version 2.0 are generally significantly higher than with version 1.0 but the reaction components of v1.0 are more fully disclosed (see "components" table below). Version 1.0 is therefore more appropriate when the most precisely defined system is desirable.

Purefrex Version Performance Comparison
PUREfrex Version 1.0 2.0/2.1
Specification    
Yield of synthesized DHFR 150 ug/ml 600 ug/ml
Reaction volume required for 100ug DHFR 660 ul
(> 3 kits)
160 ul
(< 1 kit)
Yield of synthesized GFP 100 ug/ml 800 ug/ml
Reaction volume required for 100ug GFP 1000 ul
(> 4 kits)
125 ul
(< 1 kit)
Version Selection Guidance
Protein Preparation -- ++
Protein Science
(translation, protein folding, etc.)
+ --
Synthetic Biology + +

 The SDS-PAGE gel below compares performance between 1.0 and 2.0 for several proteins. 1 ul of a standard 20ul reaction mixture was applied to each lane following a 4 hour reaction. 

 

PUREfrex v2.0 has less contaminants 

Improved purification of PUREfrex® v2.0 components greatly reduced the levels of RNase and ß-galactosidase contaminants. In addition, lipopolysaccharide (LPS) levels are reduced to to approximately 0.1 EU per 1 µL of reaction mixture. All proteinous components of PUREfrex®2.0 have no tags for purification and detection. It allows to fuse your protein with any tag to purify the product.

 

PUREfrex 2.0 Kit Contents and Storage
Reagent Quantity Description Storage
Solution
I
125 µL Amino acids, NTPs, tRNAs and substrates for enzymes etc. -20 °C
Solution
II
12.5 µL Proteins in 30 % glycerol buffer -20 °C or -80 °C2
Solution
III
25 µL Ribosome (20 µM) -80 °C2
DHFR DNA 3 10 µL PCR product containing a gene encoding dihydrofolate reductase (DHFR) from E.coli as a positive control. (20 ng/µL) -20 °C
  1. Indicated temperature shows storage temperature after opening the kit. Please store the kit at -80 °C before opening.
  2. The rest of solution should be frozen rapidly in liquid nitrogen or dry ice/ethanol, and be stored at -80 °C. Divide into aliquots, if necessary, and avoid refreeze and thaw as much as possible.
  3. For DHFR synthesis, use 1 µL of DHFR DNA for 20 µL of reaction. DHFR DNA sequence.

PUREfrex 2.0 General Reaction Protocol

1) The amounts given are for 20 µL reaction. For scaling up the reaction, adjust the volume of reagents accordingly.
2) Thaw Solution I by incubation at room temperature or 37 °C for 1 minute for completely dissolving, and then cool on ice.
3) Thaw Solution II and III on ice.
4) Mix Solution I, II and III respectively by vortex and centrifuge briefly to collect each solution at the bottom.
5) Assemble the reaction mixture in a tube as follows. Add the template DNA to 1 – 3 ng/µL per 1 kb.
6) Incubate the tube at 37 °C for 2 – 4 hours on a heat block or a water bath.
7) Analyze the synthesized products. Please add the same amount of H2O to the reaction for the sample of SDS-PAGE.

Contents of a standard PUREfrex reaction volume
Water 7-X µL
Solution I 10 µL
Solution II 1 µL
Solution III 1 µL
Template DNA * X µL
Total 20 µL
* Please visit the template DNA preparation site

PUREfrex Ordering Information
Product Name
(click for price and order info)
Catalog Number Total Reaction Volume Notes Product Information Page
Kits
PUREfrex 2.0
GFK-PF201-0.25-EX 250 ul   2.0
GFK-PF201-0.25-5-EX 5 x 250 ul (packaged as 5 x 250 ul) Sales to be discontinued
GFK-PF201-2ML-EX 1 x 2 ml New size !
GFK-PF201-10ML-EX 5 x 2 ml Note: cat. no. change from GFK-PF201-10-EX
Current generation kit for protein synthesis. Contains DTT as a reducing agent.
PUREfrex 2.1
GFK-PF213-0.25-EX 250 ul   2.1
GFK-PF213-0.25-5-EX 5 x 250 ul (packaged as 5 x 250 ul) Sales to be discontinued
GFK-PF213-2ML-EX 1 x 2 ml New size!
 GFK-PF213-10ML-EX  5 x 2 ml Note: cat. no. change from GFK-PF213-10-EX
Current generation kit for proteins with disulfide bonds. Formulated for user control of redox environment. 
PUREfrex 1.0
GFK-PF001-0.25-EX 250 ul   1.0
GFK-PF001-0.25-5-EX 1250 ul (packaged as 5 x 250 ul)  Sales to be discontinued
GFK-PF001-2ML-EX 1 x 2 ml  New size!
 GFK-PF001-10ML-EX 5 x 2 ml Note: cat. no. change from GFK-PF001-10-EX
Prior generation kit for protein science research and synthetic biology. Components are fully disclosed.
Custom formulated kits are based on 1.0 components. Please inquire about custom kits.   
PUREfrex Reaction Supplements
DnaK Mix GFK-PF003-0.5-EX for 500 ul of reaction mix   Supplements 
GFK-PF003-10ML-EX 5 x 2 ml  Note: cat. no. change from GFK-PF003-10-EX
GroE Mix GFK-PF004-0.5-EX for 500 ul of reaction mix   Supplements 
PF004-10ML-EX 5 x 2 ml  Note: cat. no. change from GFK-PF004-10-EX
Supplements for synthesis of aggregate-prone proteins.
DsbC Set GFK-PF005-0.5-EX for 500 ul of reaction mix   Supplements 
PF005-10ML-EX 5 x 2 ml Note: cat. no. change from GFK-PF005-10-EX
PDI Set GFK-PF006-0.5-EX for 500 ul of reaction mix    Supplements 
PF006-10ML-EX 5 x 2 ml Note: cat. no. change from GFK-PF006-10-EX
Supplements for synthesis of proteins containing disufide bonds.
EF-P GFK-PFS052-0.5-EX for 500 ul of reaction mix    Supplements 
PFS052-10ML-EX 5 x 2 ml Note: cat. no. change from GFK-PFS052-10-EX
Supplement for use when consecutive prolines are in target protein.

PUREfrex® is for in vitro research only. PUREfrex® should not be used for the therapy, diagnostic or administration to animals including human and should not be used as food or cosmetics etc. To avoid the contamination of nuclease, nuclease-free-treated water, reagents and materials should be used. We also recommend wearing gloves and mask.

"PUREfrex" is a registered trademark of the Gene Frontier Corporation. All rights reserved. 2021.